Motif View

Internal ID 17658992
Source Database TransTermHP TERM 903
Feature Type terminator
Name
Rho-independent transcription terminator TERM 903
Sequence TGGCCCGCAAACTCGCGGGCCA
Look for more occurrences
Start 4143051
End 4143072
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATGAAAAGCTCCCGA(5' tail) TGGCCCGC(5' stem) AAACTC(loop) GCGGGCCA(3' stem) TTTTGTGAAAGCTCA(3' tail). Confidence: 100. opp_overlap 4143044

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685