Motif View

Internal ID 17659447
Source Database TransTermHP TERM 168
Feature Type terminator
Name
Rho-independent transcription terminator TERM 168
Sequence CGAGGGTGTCAGTCACGCCCGGCGCGACTGACACCACCG
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Start 745972
End 746010
Strand -
Genomic Context
Replicon Pseudomonas syringae pv. syringae B728a chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCTGATCGCCAAAG(5' tail) CGGTGGTGTCAGTCGCGC(5' stem) CGG(loop) GCGTGACTGACACCCTCG(3' stem) ACTTCAGACGGCTCA(3' tail). Confidence: 91. opp_overlap 745963, overlap 745971

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685