Motif View

Internal ID 17659783
Source Database TransTermHP TERM 651
Feature Type terminator
Name
Rho-independent transcription terminator TERM 651
Sequence CGCCGCCGTGGCCGAGGGCGCTGCGGCGGCG
Look for more occurrences
Start 2484531
End 2484561
Strand -
Genomic Context
Replicon Pseudomonas syringae pv. syringae B728a chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCGCTGATCGAGAA(5' tail) CGCCGCCGCAGC(5' stem) GCCCTCG(loop) GCCACGGCGGCG(3' stem) TCCTGTCTGGGTCAG(3' tail). Confidence: 95. opp_overlap 2484528 2484531, overlap 2484515 2484512

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685