Motif View

Internal ID 17660046
Source Database TransTermHP TERM 1057
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1057
Sequence CGGCCTGCATTGCAGGCCG
Look for more occurrences
Start 4608964
End 4608982
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. syringae B728a chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGAGCATTCTGACGA(5' tail) CGGCCTGC(5' stem) ATT(loop) GCAGGCCG(3' stem) TTTTCATTTGAGTGT(3' tail). Confidence: 100. overlap 4608958

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685