Motif View

Internal ID 17660590
Source Database TransTermHP TERM 408
Feature Type terminator
Name
Rho-independent transcription terminator TERM 408
Sequence GCAGAAGGCGAAGCCCTTCTGC
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Start 1794853
End 1794874
Strand -
Genomic Context
Replicon Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCACGAAAAAAAACA(5' tail) GCAGAAGG(5' stem) GCTTCG(loop) CCTTCTGC(3' stem) GCTGATACTGTTATG(3' tail). Confidence: 95. overlap 1794851

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685