Motif View

Internal ID 17660742
Source Database TransTermHP TERM 651
Feature Type terminator
Name
Rho-independent transcription terminator TERM 651
Sequence GCCCTGCACTTGCAGGGC
Look for more occurrences
Start 2631437
End 2631454
Strand -
Genomic Context
Replicon Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGTCGATAAAAAAA(5' tail) GCCCTGC(5' stem) AAGT(loop) GCAGGGC(3' stem) TTCAATTGACAAAGT(3' tail). Confidence: 100. opp_overlap 2631437

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685