| Internal ID | 17660971 | Source Database | TransTermHP TERM 1042 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1042
|
| Sequence |
TCGGCCACAAAAAAACCACCTGATCAGGTGGTTTTTTTGTGTGCCGC Look for more occurrences |
| Start | 4590370 |
| End | 4590416 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CTGTTCTGATTTAAA(5' tail) GCGGCACACAAAAAAACCACCT(5' stem) GATC(loop) AGGTGGTTTTTTTGTG-GCCGA(3' stem) AACAAGCCTGCGATC(3' tail). Confidence: 100. gap 1, opp_overlap 4590386, overlap 4590371 4590386 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|