Motif View

Internal ID 17660973
Source Database TransTermHP TERM 1044
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1044
Sequence CCACCTGATCAGGTGG
Look for more occurrences
Start 4590386
End 4590401
Strand +
Genomic Context
Replicon Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGCACACAAAAAAA(5' tail) CCACCT(5' stem) GATC(loop) AGGTGG(3' stem) TTTTTTTGTGGCCGA(3' tail). Confidence: 100. opp_overlap 4590371 4590370 4590386

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685