Motif View

Internal ID 17661310
Source Database TransTermHP TERM 137
Feature Type terminator
Name
Rho-independent transcription terminator TERM 137
Sequence ACCCCGTCAATTTGGCGGGGC
Look for more occurrences
Start 589094
End 589114
Strand -
Genomic Context
Replicon Pseudomonas protegens Pf-5 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTTCTGGCAAAAAAA(5' tail) GCCCCGCCA(5' stem) AAT(loop) TGACGGGGT(3' stem) TGAGGTACGAGCGTG(3' tail). Confidence: 100. overlap 589095

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685