Internal ID | 17661480 | Source Database | TransTermHP TERM 384 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 384
|
Sequence |
CAAAACCCCGACCAGTTGCCTGGCCGGGGTTTTG Look for more occurrences |
Start | 1455824 |
End | 1455857 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas protegens Pf-5 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CTCCCTGCTACAAAA(5' tail) CAAAACCCCGGCCAG(5' stem) GCAA(loop) CTGGTCGGGGTTTTG(3' stem) TGTTTTCAGCCTGGC(3' tail). Confidence: 100. opp_overlap 1455822 1455824 1455829, overlap 1455829 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
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