| Internal ID | 17661946 | Source Database | TransTermHP TERM 1139 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1139
|
| Sequence |
CTCTCGCCCGGCGGTATCGCTACAGCCGGACGGGAG Look for more occurrences |
| Start | 5078188 |
| End | 5078223 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas protegens Pf-5 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ACATCGCGAAAAACA(5' tail) CTCTCGCCCGGCGGTA(5' stem) TCGC(loop) TACAGCCGGACGGGAG(3' stem) TTTTTTGCTTTTTTT(3' tail). Confidence: 100. opp_overlap 5078186 5078188 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|