| Internal ID | 17661948 | Source Database | TransTermHP TERM 1141 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1141
|
| Sequence |
CCGCCTGCGCCCCTCCATGGAGGGGCGCAGGCGG Look for more occurrences |
| Start | 5079170 |
| End | 5079203 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas protegens Pf-5 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GATGCTTGGCTGATG(5' tail) CCGCCTGCGCCCCTC(5' stem) CATG(loop) GAGGGGCGCAGGCGG(3' stem) TGTTTTCCATCAGGC(3' tail). Confidence: 100. overlap 5079168 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|