Motif View

Internal ID 17662362
Source Database TransTermHP TERM 58
Feature Type terminator
Name
Rho-independent transcription terminator TERM 58
Sequence GCGCCCGGCGCTCGCCGGGCGC
Look for more occurrences
Start 336888
End 336909
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCTCGGGGCAGGGAA(5' tail) GCGCCCGGC(5' stem) GAGC(loop) GCCGGGCGC(3' stem) CGGGACTCAGGCTTC(3' tail). Confidence: 91. opp_overlap 336908

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685