Motif View

Internal ID 17662897
Source Database TransTermHP TERM 957
Feature Type terminator
Name
Rho-independent transcription terminator TERM 957
Sequence CAGAACCCCTGAAATGCTTGGCATTTCAGGGGTTTTG
Look for more occurrences
Start 4514339
End 4514375
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGCCACAGAAAAGA(5' tail) CAAAACCCCTGAAATGC(5' stem) CAA(loop) GCATTTCAGGGGTTCTG(3' stem) GCCATATGTAATGGC(3' tail). Confidence: 100. opp_overlap 4514344, overlap 4514337 4514344

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685