Motif View

Internal ID 17662899
Source Database TransTermHP TERM 959
Feature Type terminator
Name
Rho-independent transcription terminator TERM 959
Sequence CCCCTGAAATGCTTGGCATTTCAGGGG
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Start 4514344
End 4514370
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PA7 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACAGAAAAGACAAAA(5' tail) CCCCTGAAATGC(5' stem) CAA(loop) GCATTTCAGGGG(3' stem) TTCTGGCCATATGTA(3' tail). Confidence: 100. opp_overlap 4514344, overlap 4514339 4514337

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685