Motif View

Internal ID 17665369
Source Database TransTermHP TERM 666
Feature Type terminator
Name
Rho-independent transcription terminator TERM 666
Sequence CCGCCGGCGCCCGCCGGCGG
Look for more occurrences
Start 3023108
End 3023127
Strand -
Genomic Context Located within gene nadA
Replicon Pseudomonas stutzeri A1501 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCCCCAAACGAAAA(5' tail) CCGCCGGC(5' stem) GGGC(loop) GCCGGCGG(3' stem) TTTCTTTGGATCACT(3' tail). Confidence: 100. opp_overlap 3023108

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685