Motif View

Internal ID 17665508
Source Database TransTermHP TERM 904
Feature Type terminator
Name
Rho-independent transcription terminator TERM 904
Sequence TCGGGCTTCCAATTGGAAGCCCGA
Look for more occurrences
Start 4231298
End 4231321
Strand -
Genomic Context
Replicon Pseudomonas stutzeri A1501 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACTCCCCTAAAAAAA(5' tail) TCGGGCTTCC(5' stem) AATT(loop) GGAAGCCCGA(3' stem) CTTCTACCTCAACCT(3' tail). Confidence: 100. opp_overlap 4231298 4231297

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685