Motif View

Internal ID 17665511
Source Database TransTermHP TERM 910
Feature Type terminator
Name
Rho-independent transcription terminator TERM 910
Sequence GCCCGCGTTTGCGGGC
Look for more occurrences
Start 4246093
End 4246108
Strand -
Genomic Context
Replicon Pseudomonas stutzeri A1501 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCAGAAACGAAAAA(5' tail) GCCCGC(5' stem) AAAC(loop) GCGGGC(3' stem) TTTTTCATGTCCGAT(3' tail). Confidence: 100. opp_overlap 4246093, overlap 4246087 4246086

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685