Internal ID | 17665913 | Source Database | TransTermHP TERM 469 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 469
|
Sequence |
CATGGCCCGTCGGCTGAATCCTGAACAGGACTTCAGCCGACGGGCCATA Look for more occurrences |
Start | 1374954 |
End | 1375002 |
Strand | + |
Genomic Context | Located within gene [Pfl01_1204] |
Replicon | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | TCGCGTGATTGAATG(5' tail) CATGGCCCGTCGGCTGAA-TCCT(5' stem) GAAC(loop) AGGACTTCAGCCGACGGGCCATA(3' stem) TTTCGTTGTCGCCAA(3' tail). Confidence: 100. gap 1, opp_overlap 1374952 1374956, overlap 1374956 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|