Internal ID | 17666196 | Source Database | TransTermHP TERM 847 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 847
|
Sequence |
CAGTCATCGGGGGCCGCTGCCCCCGATGATGG Look for more occurrences |
Start | 2562956 |
End | 2562987 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | GATCGGGTCTGAAAT(5' tail) CCATCATCGGGGGC(5' stem) AGCG(loop) GCCCCCGATGACTG(3' stem) TGAGGCTCAGCCGGT(3' tail). Confidence: 90. overlap 2562955 2562959 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|