Motif View

Internal ID 17666564
Source Database TransTermHP TERM 1323
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1323
Sequence TGCCTGCCTGTGGTAGGCA
Look for more occurrences
Start 4286719
End 4286737
Strand -
Genomic Context
Replicon Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTTTTGGCAAAAAAA(5' tail) TGCCTACC(5' stem) ACA(loop) GGCAGGCA(3' stem) CTGTTGAAACTCGAA(3' tail). Confidence: 100. opp_overlap 4286718

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685