Motif View

Internal ID 17666918
Source Database TransTermHP TERM 1765
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1765
Sequence CCGGCCTGATTTCAGGCCGG
Look for more occurrences
Start 5531086
End 5531105
Strand +
Genomic Context
Replicon Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCTTCCTGCACCGA(5' tail) CCGGCCTG(5' stem) ATTT(loop) CAGGCCGG(3' stem) TTTTGCTTTTAGCGC(3' tail). Confidence: 100. overlap 5531101

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685