Motif View

Internal ID 17667983
Source Database TransTermHP TERM 75
Feature Type terminator
Name
Rho-independent transcription terminator TERM 75
Sequence GCCCCTGTCTGCATCGCAGACAGGGGC
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Start 194454
End 194480
Strand -
Genomic Context
Replicon Pseudomonas putida GB-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGATTCAAACCCAAA(5' tail) GCCCCTGTCTGC(5' stem) GAT(loop) GCAGACAGGGGC(3' stem) TTTGTCTTTTCCGGG(3' tail). Confidence: 100. opp_overlap 194450 194454, overlap 194449

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685