Motif View

Internal ID 17668031
Source Database TransTermHP TERM 155
Feature Type terminator
Name
Rho-independent transcription terminator TERM 155
Sequence ACCCCGTCGATTGGCGGGGC
Look for more occurrences
Start 423772
End 423791
Strand -
Genomic Context
Replicon Pseudomonas putida GB-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGGACAAAAAAAA(5' tail) GCCCCGCC(5' stem) AATC(loop) GACGGGGT(3' stem) TGAGGTACGAGCGTG(3' tail). Confidence: 100. overlap 423773

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685