Motif View

Internal ID 17668135
Source Database TransTermHP TERM 322
Feature Type terminator
Name
Rho-independent transcription terminator TERM 322
Sequence GCCGCTGCCAATCAGCGGC
Look for more occurrences
Start 946425
End 946443
Strand -
Genomic Context
Replicon Pseudomonas putida GB-1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAGCACATAAAAAAA(5' tail) GCCGCTG(5' stem) ATTGG(loop) CAGCGGC(3' stem) TTTAAAAGGCTAACA(3' tail). Confidence: 100. opp_overlap 946425

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685