Motif View

Internal ID 17669300
Source Database TransTermHP TERM 645
Feature Type terminator
Name
Rho-independent transcription terminator TERM 645
Sequence GACCCGCTTGCGGGTC
Look for more occurrences
Start 2602802
End 2602817
Strand +
Genomic Context
Replicon Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AACTAACTCCTTTTA(5' tail) GACCCG(5' stem) CTTG(loop) CGGGTC(3' stem) TTTTTTTGGTGCGCC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685