Motif View

Internal ID 17669996
Source Database TransTermHP TERM 146
Feature Type terminator
Name
Rho-independent transcription terminator TERM 146
Sequence CGGGAAAGCACCTTCGGGTGCTTTCCGCG
Look for more occurrences
Start 521501
End 521529
Strand -
Genomic Context
Replicon Pseudomonas fulva 12-X chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTCCCGGCGCAAAAA(5' tail) CGCGGAAAGCACC(5' stem) CGAA(loop) GGTGCTTTCC-CG(3' stem) TTGACGCTTGTGGCT(3' tail). Confidence: 100. gap 1, opp_overlap 521494 521509

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685