Motif View

Internal ID 17670139
Source Database TransTermHP TERM 356
Feature Type terminator
Name
Rho-independent transcription terminator TERM 356
Sequence CGGGCCATGTCCGCGTAATCTTGGGCATGGCCCG
Look for more occurrences
Start 1088889
End 1088922
Strand +
Genomic Context
Replicon Pseudomonas fulva 12-X chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCCGGCAGTGGGAG(5' tail) CGGGCCATGTCCGCG(5' stem) TAAT(loop) CTTGGGCATGGCCCG(3' stem) TTTGCACTGGATGAG(3' tail). Confidence: 91. overlap 1088887

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685