Motif View

Internal ID 17670208
Source Database TransTermHP TERM 465
Feature Type terminator
Name
Rho-independent transcription terminator TERM 465
Sequence GCCCGCCGTCATGGCGGGC
Look for more occurrences
Start 1484371
End 1484389
Strand +
Genomic Context
Replicon Pseudomonas fulva 12-X chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGTTGATGCTGTTT(5' tail) GCCCGCCG(5' stem) TCA(loop) TGGCGGGC(3' stem) TTTTTTATTCCGCTG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685