Motif View

Internal ID 17670238
Source Database TransTermHP TERM 511
Feature Type terminator
Name
Rho-independent transcription terminator TERM 511
Sequence CCGGGGCCTGCCCCGG
Look for more occurrences
Start 1621001
End 1621016
Strand -
Genomic Context
Replicon Pseudomonas fulva 12-X chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACAGGCATAAAAAAA(5' tail) CCGGGG(5' stem) CAGG(loop) CCCCGG(3' stem) TTTCTCTGGTGTGCG(3' tail). Confidence: 100. opp_overlap 1621001

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685