Motif View

Internal ID 17670275
Source Database TransTermHP TERM 572
Feature Type terminator
Name
Rho-independent transcription terminator TERM 572
Sequence GGCGACGCAGTCCGCTGCGTCGCC
Look for more occurrences
Start 1813637
End 1813660
Strand +
Genomic Context
Replicon Pseudomonas fulva 12-X chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTAAATGGGATAGG(5' tail) GGCGACGCAG(5' stem) TCCG(loop) CTGCGTCGCC(3' stem) TTTTTCAGCGTTCCA(3' tail). Confidence: 100. opp_overlap 1813629

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685