Internal ID | 17670897 | Source Database | TransTermHP TERM 2 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 2
|
Sequence |
TGAAAAGCCCCTGCCGATGTGAATCGTCAGGGGCTTTTTA Look for more occurrences |
Start | 6379 |
End | 6418 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas mendocina NK-01 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CCAGTTGGCGTGAAA(5' tail) TGAAAAGCCCCTGCCGAT(5' stem) GTGA(loop) ATCGTCAGGGGCTTTTTA(3' stem) TTTGGGCGGGACTTA(3' tail). Confidence: 100. opp_overlap 6379 6385, overlap 6385 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|