| Internal ID | 17670898 | Source Database | TransTermHP TERM 3 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 3
|
| Sequence |
TAAAAAGCCCCTGACGATTCACATCGGCAGGGGCTTTTCA Look for more occurrences |
| Start | 6379 |
| End | 6418 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas mendocina NK-01 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCAGTTGGCGTGAAA(5' tail) TGAAAAGCCCCTGCCGAT(5' stem) GTGA(loop) ATCGTCAGGGGCTTTTTA(3' stem) TTTGGGCGGGACTTA(3' tail). Confidence: 93. opp_overlap 6379 6385, overlap 6385 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|