| Internal ID | 17671029 | Source Database | TransTermHP TERM 199 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 199
|
| Sequence |
CCCCGGATTGCATCCGGGCTACAGATCGCGTAGCCCGGATGCAATCCGGGG Look for more occurrences |
| Start | 900366 |
| End | 900416 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas mendocina NK-01 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGGCGTTAAAAGCGA(5' tail) CCCCGGATTGCATCCGGGCTAC(5' stem) AGATCGC(loop) GTAGCCCGGATGCAATCCGGGG(3' stem) ATTTTCGAGCACAAG(3' tail). Confidence: 100. opp_overlap 900366 900363 900362, overlap 900346 900365 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|