| Internal ID | 17671714 | Source Database | TransTermHP TERM 1236 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1236
|
| Sequence |
TGCAAAAGGCCCCTGGCAGCGACAACCCTGCCAGGGGCCTTTTCA Look for more occurrences |
| Start | 4549510 |
| End | 4549554 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas mendocina NK-01 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTCTGAGCCCACGCA(5' tail) TGCAAAAGGCCCCTGGCAGCG(5' stem) ACAA(loop) CCCTGCCAGGGGCCTTTT-CA(3' stem) TATCTGCTCAGCCCT(3' tail). Confidence: 100. gap 1, opp_overlap 4549517, overlap 4549517 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|