Motif View

Internal ID 17671853
Source Database TransTermHP TERM 3
Feature Type terminator
Name
Rho-independent transcription terminator TERM 3
Sequence GATCGCAGCCTTCGGCAGCTCCTACAGCCGAAGGCTGCGATC
Look for more occurrences
Start 11029
End 11070
Strand -
Genomic Context
Replicon Pseudomonas fluorescens F113 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTGGAAGATTGAAAA(5' tail) GATCGCAGCCTTCGGCTG(5' stem) TAGGAG(loop) CTGCCGAAGGCTGCGATC(3' stem) TTTTGGTGCTATAAA(3' tail). Confidence: 100. opp_overlap 11029

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685