Motif View

Internal ID 17671982
Source Database TransTermHP TERM 183
Feature Type terminator
Name
Rho-independent transcription terminator TERM 183
Sequence GACCCCGGCCCATTGGCCGGGGTC
Look for more occurrences
Start 791581
End 791604
Strand -
Genomic Context
Replicon Pseudomonas fluorescens F113 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGACAGGCAAAAAAA(5' tail) GACCCCGGCC(5' stem) AATG(loop) GGCCGGGGTC(3' stem) TTTTCTACACCGCTT(3' tail). Confidence: 100. opp_overlap 791581

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685