Motif View

Internal ID 17672098
Source Database TransTermHP TERM 336
Feature Type terminator
Name
Rho-independent transcription terminator TERM 336
Sequence CGGGCAGACACTCTATTGCGTGTACTGCCCG
Look for more occurrences
Start 1434203
End 1434233
Strand +
Genomic Context
Replicon Pseudomonas fluorescens F113 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTGGAATTCCTGGG(5' tail) CGGGCAG-ACACTC(5' stem) TATT(loop) GCGTGTACTGCCCG(3' stem) TTTTTGCGTCAGCGC(3' tail). Confidence: 100. gap 1

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685