Motif View

Internal ID 17673888
Source Database TransTermHP TERM 32
Feature Type terminator
Name
Rho-independent transcription terminator TERM 32
Sequence CTCTTTGAATTTCAAGGAG
Look for more occurrences
Start 131098
End 131116
Strand -
Genomic Context
Replicon Pseudomonas putida S16 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGTCGGAAAGAAAAA(5' tail) CTCCTTGA(5' stem) AAT(loop) TCAAAGAG(3' stem) TTAAGCTATCCAGGT(3' tail). Confidence: 93.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685