Motif View

Internal ID 17673940
Source Database TransTermHP TERM 113
Feature Type terminator
Name
Rho-independent transcription terminator TERM 113
Sequence ACCCCGTCGATTGGCGGGGC
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Start 389813
End 389832
Strand -
Genomic Context
Replicon Pseudomonas putida S16 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTCAAGGCAAAAAAA(5' tail) GCCCCGCC(5' stem) AATC(loop) GACGGGGT(3' stem) TGAGGTACGAGCGTG(3' tail). Confidence: 93. overlap 389814

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685