Motif View

Internal ID 17673954
Source Database TransTermHP TERM 135
Feature Type terminator
Name
Rho-independent transcription terminator TERM 135
Sequence CGCCCTTGGCCTGTTTCATTCGGCCCGGGGCG
Look for more occurrences
Start 437404
End 437435
Strand +
Genomic Context
Replicon Pseudomonas putida S16 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGTTCCTGCGCAT(5' tail) CGCCCTTGGCC(5' stem) TGTTTCATTC(loop) GGCCCGGGGCG(3' stem) TTTTTTTTTGCCTGT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685