| Internal ID | 17674415 | Source Database | TransTermHP TERM 930 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 930
|
| Sequence |
CCCGCTCCCACAGATACAGCGCCCTGTCCGCGGACTGCGCTGTACCTGTGGGAGCGGG Look for more occurrences |
| Start | 3567189 |
| End | 3567246 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas putida S16 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCTTTCGCGGGTGAA(5' tail) CCCGCTCCCACAGATACAGCGCCCTGTC(5' stem) CGCG(loop) GACTG--CGCTGTACCTGTGGGAGCGGG(3' stem) TTTACCCGCGAAGAG(3' tail). Confidence: 100. gap 2, opp_overlap 3567203 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|