Internal ID | 17674690 | Source Database | TransTermHP TERM 1380 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 1380
|
Sequence |
GGGCCGCTCTGCGGCCC Look for more occurrences |
Start | 5086942 |
End | 5086958 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas putida S16 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CCTTGTATCGCGAAA(5' tail) GGGCCGC(5' stem) AGA(loop) GCGGCCC(3' stem) CAGGACTCCAGCAGT(3' tail). Confidence: 90. |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|