| Internal ID | 17674994 | Source Database | TransTermHP TERM 177 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 177
|
| Sequence |
GATGCCAGGCGCCCGTAGCGTGCGCCTGGCTC Look for more occurrences |
| Start | 730993 |
| End | 731024 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas putida BIRD-1 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GATCTTTCCGATTTT(5' tail) GATGCCAGGCGCCCG(5' stem) TAG(loop) CGTGCGCCTGGC-TC(3' stem) TCCTTTGTTTATCTG(3' tail). Confidence: 90. gap 1, overlap 730992 730993 730996 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|