| Internal ID | 17675086 | Source Database | TransTermHP TERM 311 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 311
|
| Sequence |
GCGGCCCCAGGATCTCGGCATAATGCATAGATTGCTGGGGCCGC Look for more occurrences |
| Start | 1298642 |
| End | 1298685 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas putida BIRD-1 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGAAAGGGCCGCGCA(5' tail) GCGGCCCCAG-GATCTCGGCA(5' stem) TAA(loop) TGCATAGATTGCTGGGGCCGC(3' stem) TTTGCGGCCCTTTCG(3' tail). Confidence: 95. gap 1, opp_overlap 1298632, overlap 1298679 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|