Motif View

Internal ID 17675623
Source Database TransTermHP TERM 27
Feature Type terminator
Name
Rho-independent transcription terminator TERM 27
Sequence TGAGCCAGGCCGGCACCGCTGCGGTGCCGCGCCTGGACCA
Look for more occurrences
Start 105848
End 105887
Strand +
Genomic Context Located within gene [PAM18_0091]
Replicon Pseudomonas aeruginosa M18 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGACCCTGGCCTCGG(5' tail) TGAGCCAGGC-CGGCACCG(5' stem) CTG(loop) CGGTGCCGCGCCTGGACCA(3' stem) GTTCTTCTTCGGCCT(3' tail). Confidence: 91. gap 1, overlap 105847

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685