Motif View

Internal ID 17675683
Source Database TransTermHP TERM 121
Feature Type terminator
Name
Rho-independent transcription terminator TERM 121
Sequence GCCCGCCCTTCGGCGGGC
Look for more occurrences
Start 558903
End 558920
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa M18 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCAGGTGAGAAAGA(5' tail) GCCCGCC(5' stem) CTTC(loop) GGCGGGC(3' stem) TTTTTCATGCCTGCG(3' tail). Confidence: 100. opp_overlap 558903 558901

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685