Motif View

Internal ID 17676208
Source Database TransTermHP TERM 985
Feature Type terminator
Name
Rho-independent transcription terminator TERM 985
Sequence GGCCCGCTGAGCAGCGGGCC
Look for more occurrences
Start 4443977
End 4443996
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa M18 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGCCGGCATCCGAA(5' tail) GGCCCGCT(5' stem) GAGC(loop) AGCGGGCC(3' stem) TTTTCGTTGGCGCGC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685