Motif View

Internal ID 17676210
Source Database TransTermHP TERM 989
Feature Type terminator
Name
Rho-independent transcription terminator TERM 989
Sequence TCAAGGGTTGAGAGCGTTAGGCTCTAAACGCTTGA
Look for more occurrences
Start 4449491
End 4449525
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa M18 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTCAAACATGAAAAA(5' tail) TCAAGCGTTTAGAGC(5' stem) CTAAC(loop) GCTCTCAACCCTTGA(3' stem) CAAGCTGCTTTCCAT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685