Motif View

Internal ID 17676260
Source Database TransTermHP TERM 1066
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1066
Sequence GCCCCTGATTTTCCTAGTGAATTTCAGGGGC
Look for more occurrences
Start 4656680
End 4656710
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa M18 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAACGCAAACGATAA(5' tail) GCCCCTGATTTTC(5' stem) CTAGT(loop) GAATTTCAGGGGC(3' stem) TTTTTCATTCTGGCC(3' tail). Confidence: 100. opp_overlap 4656680 4656674

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685